Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AC004466.1-201ENST00000599515 1080 ntBASIC17.84■□□□□ 0.45
RNF41Q9H4P4 MIR6775-201ENST00000617557 69 ntBASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF41Q9H4P4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 LINC00528-201ENST00000600723 2160 ntBASIC17.83■□□□□ 0.45
RNF41Q9H4P4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF41Q9H4P4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 ANKRD19P-201ENST00000338192 862 ntBASIC17.83■□□□□ 0.44
RNF41Q9H4P4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 FTLP10-202ENST00000505798 471 ntBASIC17.83■□□□□ 0.44
RNF41Q9H4P4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 AC133552.6-201ENST00000613406 534 ntBASIC17.83■□□□□ 0.44
RNF41Q9H4P4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 AC138466.3-201ENST00000619983 221 ntBASIC17.83■□□□□ 0.44
RNF41Q9H4P4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF41Q9H4P4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 CLUHP2-201ENST00000426660 1303 ntBASIC17.82■□□□□ 0.44
RNF41Q9H4P4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms