Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RSPO3Q9BXY4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 KLF2P2-201ENST00000416807 1039 ntBASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 AL442647.2-201ENST00000429864 857 ntBASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 MYCLP2-201ENST00000449268 967 ntBASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 AP001582.1-201ENST00000525856 295 ntBASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 CLUHP6-201ENST00000580789 941 ntBASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 AC008761.3-201ENST00000624803 892 ntBASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 AC003102.2-201ENST00000589195 1469 ntBASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.86□□□□□ -0.19
RSPO3Q9BXY4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 C1QBPP1-201ENST00000400117 770 ntBASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 ELK1P1-201ENST00000485699 580 ntBASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 AC093004.1-201ENST00000508850 424 ntBASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 AC055876.2-201ENST00000531834 546 ntBASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 API5-211ENST00000534695 560 ntTSL 5 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 CTBP2P3-201ENST00000585629 1255 ntBASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 RPSAP52-203ENST00000622976 1023 ntBASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms