Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 AC091691.1-201ENST00000583587 1018 ntBASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 PPY-202ENST00000587006 431 ntTSL 3 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
COL25A1Q9BXS0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 TPT1P9-201ENST00000413759 514 ntBASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 DUX4L31-201ENST00000446466 1136 ntBASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 MIR1587-201ENST00000583319 53 ntBASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 MED25-209ENST00000612791 881 ntTSL 5 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 OR6D1P-202ENST00000641007 5290 ntBASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 RPL13AP3-202ENST00000494676 1473 ntBASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 AL121753.2-201ENST00000624581 1461 ntBASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COL25A1Q9BXS0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 AC138761.6-201ENST00000583997 1423 ntBASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 MST1L-201ENST00000442552 2185 ntBASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 SIRPB3P-201ENST00000340424 1216 ntBASIC14.86□□□□□ -0.03
COL25A1Q9BXS0 HDGF-202ENST00000368206 960 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms