Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 SSR4P1-203ENST00000599569 2260 ntBASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 LINC00528-201ENST00000600723 2160 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 ST20-AS1-201ENST00000560255 4223 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 INTS4P2-202ENST00000614726 2019 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 OR8S1-201ENST00000310194 1080 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 SOCS2P1-201ENST00000417727 557 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 GPR53P-205ENST00000457298 1084 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 AL359711.2-201ENST00000563105 872 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 AC090616.6-203ENST00000579186 1945 ntBASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
PCGF1Q9BSM1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 PTENP1-202ENST00000532280 3996 ntBASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms