Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AC015922.1-201ENST00000421102 1152 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 MTND6P24-201ENST00000440466 518 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 SAMD11P1-201ENST00000571429 661 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AC025048.3-201ENST00000590609 569 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AC005702.4-201ENST00000618393 416 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AL360270.3-201ENST00000609118 1348 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AC018665.1-201ENST00000622927 1362 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 CICP16-201ENST00000502609 2813 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 AGGF1P1-201ENST00000509500 2073 ntBASIC14.8□□□□□ -0.04
EBF4Q9BQW3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EBF4Q9BQW3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 RPL13P2-201ENST00000440687 659 ntBASIC14.79□□□□□ -0.04
EBF4Q9BQW3 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.79□□□□□ -0.04
EBF4Q9BQW3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EBF4Q9BQW3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms