Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.45■□□□□ 0.38
ARID3AQ99856 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARID3AQ99856 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARID3AQ99856 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
ARID3AQ99856 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 GPS2P2-201ENST00000430745 888 ntBASIC17.44■□□□□ 0.38
ARID3AQ99856 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.44■□□□□ 0.38
ARID3AQ99856 DNAJB3-202ENST00000449667 1266 ntBASIC17.44■□□□□ 0.38
ARID3AQ99856 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ARID3AQ99856 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.44■□□□□ 0.38
ARID3AQ99856 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.44■□□□□ 0.38
ARID3AQ99856 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.44■□□□□ 0.38
ARID3AQ99856 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ARID3AQ99856 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARID3AQ99856 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ARID3AQ99856 AC087481.3-201ENST00000602886 1894 ntBASIC17.44■□□□□ 0.38
ARID3AQ99856 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ARID3AQ99856 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.44■□□□□ 0.38
ARID3AQ99856 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC17.44■□□□□ 0.38
ARID3AQ99856 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ARID3AQ99856 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.43■□□□□ 0.38
ARID3AQ99856 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ARID3AQ99856 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ARID3AQ99856 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ARID3AQ99856 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
ARID3AQ99856 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 KRT18P32-201ENST00000424695 1287 ntBASIC17.43■□□□□ 0.38
ARID3AQ99856 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.43■□□□□ 0.38
ARID3AQ99856 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.43■□□□□ 0.38
ARID3AQ99856 AC061975.2-201ENST00000581722 295 ntBASIC17.43■□□□□ 0.38
ARID3AQ99856 AP001160.2-201ENST00000596071 487 ntBASIC17.43■□□□□ 0.38
ARID3AQ99856 AC004835.2-201ENST00000603762 682 ntBASIC17.43■□□□□ 0.38
ARID3AQ99856 AC079781.4-201ENST00000641908 219 ntBASIC17.43■□□□□ 0.38
ARID3AQ99856 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.43■□□□□ 0.38
ARID3AQ99856 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.43■□□□□ 0.38
ARID3AQ99856 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ARID3AQ99856 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ARID3AQ99856 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID3AQ99856 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID3AQ99856 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
ARID3AQ99856 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.42■□□□□ 0.38
ARID3AQ99856 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.42■□□□□ 0.38
ARID3AQ99856 RET-205ENST00000615310 4337 ntTSL 5 BASIC17.42■□□□□ 0.38
ARID3AQ99856 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ARID3AQ99856 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID3AQ99856 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ARID3AQ99856 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.42■□□□□ 0.38
ARID3AQ99856 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID3AQ99856 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.42■□□□□ 0.38
ARID3AQ99856 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.42■□□□□ 0.38
ARID3AQ99856 AC254562.1-201ENST00000417586 456 ntBASIC17.42■□□□□ 0.38
ARID3AQ99856 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.42■□□□□ 0.38
ARID3AQ99856 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.42■□□□□ 0.38
ARID3AQ99856 CNN2P11-201ENST00000429351 262 ntBASIC17.42■□□□□ 0.38
ARID3AQ99856 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.42■□□□□ 0.38
ARID3AQ99856 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID3AQ99856 LINC02084-201ENST00000606069 1096 ntBASIC17.42■□□□□ 0.38
ARID3AQ99856 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ARID3AQ99856 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.42■□□□□ 0.38
ARID3AQ99856 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID3AQ99856 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms