Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.82■□□□□ 0.12
SMOQ99835 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 TUBB1P2-201ENST00000422712 1306 ntBASIC15.82■□□□□ 0.12
SMOQ99835 TUBB1P1-201ENST00000503144 1300 ntBASIC15.82■□□□□ 0.12
SMOQ99835 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 KRT8P4-201ENST00000509735 1454 ntBASIC15.82■□□□□ 0.12
SMOQ99835 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMOQ99835 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.82■□□□□ 0.12
SMOQ99835 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.82■□□□□ 0.12
SMOQ99835 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.82■□□□□ 0.12
SMOQ99835 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.81■□□□□ 0.12
SMOQ99835 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.81■□□□□ 0.12
SMOQ99835 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SMOQ99835 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.81■□□□□ 0.12
SMOQ99835 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.81■□□□□ 0.12
SMOQ99835 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.81■□□□□ 0.12
SMOQ99835 CHMP1AP1-201ENST00000445563 662 ntBASIC15.81■□□□□ 0.12
SMOQ99835 AL355994.2-201ENST00000447882 704 ntBASIC15.81■□□□□ 0.12
SMOQ99835 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.81■□□□□ 0.12
SMOQ99835 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 MIR4683-201ENST00000579659 81 ntBASIC15.81■□□□□ 0.12
SMOQ99835 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
SMOQ99835 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SMOQ99835 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SMOQ99835 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMOQ99835 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SMOQ99835 AL023775.1-201ENST00000454907 1746 ntBASIC15.8■□□□□ 0.12
SMOQ99835 DBET-201ENST00000630918 3363 ntBASIC15.8■□□□□ 0.12
SMOQ99835 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.8■□□□□ 0.12
SMOQ99835 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.8■□□□□ 0.12
SMOQ99835 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.8■□□□□ 0.12
SMOQ99835 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SMOQ99835 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.8■□□□□ 0.12
SMOQ99835 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.8■□□□□ 0.12
SMOQ99835 AC007969.1-201ENST00000433675 447 ntBASIC15.8■□□□□ 0.12
SMOQ99835 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.8■□□□□ 0.12
SMOQ99835 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SMOQ99835 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SMOQ99835 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.8■□□□□ 0.12
SMOQ99835 ZACNP1-201ENST00000612259 710 ntBASIC15.8■□□□□ 0.12
SMOQ99835 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.8■□□□□ 0.12
SMOQ99835 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.8■□□□□ 0.12
SMOQ99835 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SMOQ99835 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.8■□□□□ 0.12
SMOQ99835 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMOQ99835 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.8■□□□□ 0.12
SMOQ99835 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMOQ99835 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.79■□□□□ 0.12
SMOQ99835 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms