Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC10.09□□□□□ -0.79
LITAFQ99732 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.09□□□□□ -0.79
LITAFQ99732 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.09□□□□□ -0.79
LITAFQ99732 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.09□□□□□ -0.79
LITAFQ99732 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.09□□□□□ -0.79
LITAFQ99732 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC10.09□□□□□ -0.79
LITAFQ99732 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.09□□□□□ -0.79
LITAFQ99732 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.09□□□□□ -0.79
LITAFQ99732 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 AC025181.2-201ENST00000606994 802 ntBASIC10.09□□□□□ -0.79
LITAFQ99732 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.09□□□□□ -0.79
LITAFQ99732 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.09□□□□□ -0.79
LITAFQ99732 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC10.09□□□□□ -0.79
LITAFQ99732 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.09□□□□□ -0.79
LITAFQ99732 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
LITAFQ99732 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC10.09□□□□□ -0.79
LITAFQ99732 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
LITAFQ99732 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
LITAFQ99732 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC10.09□□□□□ -0.79
LITAFQ99732 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
LITAFQ99732 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
LITAFQ99732 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.09□□□□□ -0.79
LITAFQ99732 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LITAFQ99732 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
LITAFQ99732 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 PCDHB18P-202ENST00000526308 3197 ntBASIC10.08□□□□□ -0.8
LITAFQ99732 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.08□□□□□ -0.8
LITAFQ99732 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LITAFQ99732 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC10.08□□□□□ -0.8
LITAFQ99732 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 CENPM-204ENST00000402420 688 ntTSL 5 BASIC10.08□□□□□ -0.8
LITAFQ99732 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 AC142381.1-201ENST00000426099 345 ntBASIC10.08□□□□□ -0.8
LITAFQ99732 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC10.08□□□□□ -0.8
LITAFQ99732 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
LITAFQ99732 DET1-205ENST00000558413 583 ntTSL 4 BASIC10.08□□□□□ -0.8
LITAFQ99732 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.08□□□□□ -0.8
LITAFQ99732 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC10.08□□□□□ -0.8
LITAFQ99732 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.08□□□□□ -0.8
LITAFQ99732 AC026979.3-201ENST00000607315 403 ntBASIC10.08□□□□□ -0.8
LITAFQ99732 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 AL031008.1-201ENST00000619963 541 ntBASIC10.08□□□□□ -0.8
LITAFQ99732 AC010507.1-201ENST00000633895 436 ntBASIC10.08□□□□□ -0.8
LITAFQ99732 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.08□□□□□ -0.8
LITAFQ99732 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.08□□□□□ -0.8
LITAFQ99732 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC10.08□□□□□ -0.8
LITAFQ99732 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.08□□□□□ -0.8
LITAFQ99732 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
LITAFQ99732 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
LITAFQ99732 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
LITAFQ99732 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LITAFQ99732 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC10.07□□□□□ -0.8
LITAFQ99732 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.07□□□□□ -0.8
LITAFQ99732 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.07□□□□□ -0.8
LITAFQ99732 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms