Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.18□□□□□ -0.46
RNF2Q99496 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 SPDYE7P-202ENST00000420373 878 ntBASIC12.18□□□□□ -0.46
RNF2Q99496 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.18□□□□□ -0.46
RNF2Q99496 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.18□□□□□ -0.46
RNF2Q99496 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.18□□□□□ -0.46
RNF2Q99496 MIR4453-201ENST00000584019 89 ntBASIC12.18□□□□□ -0.46
RNF2Q99496 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.18□□□□□ -0.46
RNF2Q99496 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.18□□□□□ -0.46
RNF2Q99496 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF2Q99496 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF2Q99496 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 CYP4F24P-201ENST00000586049 1580 ntBASIC12.18□□□□□ -0.46
RNF2Q99496 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.18□□□□□ -0.46
RNF2Q99496 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 AC140479.7-201ENST00000636301 2332 ntBASIC12.17□□□□□ -0.46
RNF2Q99496 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.17□□□□□ -0.46
RNF2Q99496 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.17□□□□□ -0.46
RNF2Q99496 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.17□□□□□ -0.46
RNF2Q99496 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RNF2Q99496 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.17□□□□□ -0.46
RNF2Q99496 HLA-J-203ENST00000494367 1087 ntBASIC12.17□□□□□ -0.46
RNF2Q99496 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.17□□□□□ -0.46
RNF2Q99496 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.17□□□□□ -0.46
RNF2Q99496 AC109322.1-201ENST00000524499 1264 ntBASIC12.17□□□□□ -0.46
RNF2Q99496 AC004449.1-201ENST00000564240 433 ntBASIC12.17□□□□□ -0.46
RNF2Q99496 AC105021.1-202ENST00000570572 669 ntBASIC12.17□□□□□ -0.46
RNF2Q99496 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.17□□□□□ -0.46
RNF2Q99496 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
RNF2Q99496 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.17□□□□□ -0.46
RNF2Q99496 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RNF2Q99496 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
RNF2Q99496 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.17□□□□□ -0.46
RNF2Q99496 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
RNF2Q99496 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
RNF2Q99496 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RNF2Q99496 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RNF2Q99496 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms