Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 FP325330.2-201ENST00000624219 5630 ntBASIC14.35□□□□□ -0.11
NR1H4Q96RI1 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 AP002761.4-201ENST00000565433 3361 ntBASIC14.34□□□□□ -0.11
NR1H4Q96RI1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 AC022447.6-201ENST00000515522 438 ntBASIC14.34□□□□□ -0.11
NR1H4Q96RI1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 MIR3652-201ENST00000579335 131 ntBASIC14.34□□□□□ -0.11
NR1H4Q96RI1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 SPTSSB-204ENST00000617024 1292 ntBASIC14.34□□□□□ -0.11
NR1H4Q96RI1 AL022326.1-202ENST00000641533 845 ntBASIC14.34□□□□□ -0.11
NR1H4Q96RI1 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR1H4Q96RI1 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR1H4Q96RI1 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.33□□□□□ -0.11
NR1H4Q96RI1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NR1H4Q96RI1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.33□□□□□ -0.11
NR1H4Q96RI1 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.33□□□□□ -0.11
NR1H4Q96RI1 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
NR1H4Q96RI1 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 AC012569.1-201ENST00000591191 1524 ntBASIC14.33□□□□□ -0.12
NR1H4Q96RI1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NR1H4Q96RI1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms