Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 AC068418.2-201ENST00000577309 3703 ntBASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.61■□□□□ 0.09
CSPG4P5Q96PW8 AL513477.1-201ENST00000602865 2407 ntBASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 AC098614.1-201ENST00000368528 745 ntBASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 ACTG1P3-201ENST00000431775 1114 ntBASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 MIR5189-201ENST00000577370 114 ntBASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 AC010319.3-201ENST00000597028 470 ntBASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 PCDHA3-202ENST00000532566 4594 ntBASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CSPG4P5Q96PW8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 AC027307.3-201ENST00000594262 1100 ntBASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSPG4P5Q96PW8 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms