Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AC020658.6-201ENST00000623564 1870 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.74■□□□□ 0.43
TRIM47Q96LD4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 COX5BP1-201ENST00000507622 393 ntBASIC17.74■□□□□ 0.43
TRIM47Q96LD4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 AC138649.2-201ENST00000615886 705 ntBASIC17.74■□□□□ 0.43
TRIM47Q96LD4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 AC011270.2-201ENST00000624293 2550 ntBASIC17.74■□□□□ 0.43
TRIM47Q96LD4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM47Q96LD4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 ACTBP8-201ENST00000403258 1108 ntBASIC17.73■□□□□ 0.43
TRIM47Q96LD4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.73■□□□□ 0.43
TRIM47Q96LD4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 AC007663.3-201ENST00000609632 465 ntBASIC17.73■□□□□ 0.43
TRIM47Q96LD4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRIM47Q96LD4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms