Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 AC093433.1-201ENST00000458048 571 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 KRT18P25-201ENST00000508931 1278 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 AC009486.1-201ENST00000569860 813 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 CU634019.7-201ENST00000624153 1185 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 FP236241.2-201ENST00000624906 1185 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 AL354702.1-201ENST00000442006 1960 ntBASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PDLIM5Q96HC4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 LRRC59-203ENST00000576448 1531 ntBASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.77□□□□□ -0.04
PDLIM5Q96HC4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 AC190387.1-201ENST00000551683 408 ntBASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 MIR4745-201ENST00000577608 62 ntBASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PDLIM5Q96HC4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 BX640514.1-201ENST00000583223 1918 ntBASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PDLIM5Q96HC4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms