Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 AC024293.1-201ENST00000467930 498 ntBASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 RN7SL396P-201ENST00000471086 295 ntBASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 AC084752.1-201ENST00000509766 622 ntBASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 RN7SL470P-201ENST00000583069 259 ntBASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 AC244250.3-201ENST00000620749 366 ntBASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 PCDHA12-202ENST00000613593 2588 ntBASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 AL139384.1-201ENST00000612143 3047 ntBASIC16.19■□□□□ 0.18
TRIM43Q96BQ3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AC092638.2-201ENST00000441105 947 ntBASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 LINC00634-202ENST00000505157 222 ntBASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 AC018629.1-201ENST00000623381 1736 ntBASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM43Q96BQ3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 RNA5SP359-201ENST00000364838 113 ntBASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 PSMD4P1-201ENST00000433951 1109 ntBASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AC114947.1-202ENST00000514136 344 ntBASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms