Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF138Q8WVD3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 AC015818.8-201ENST00000587907 1519 ntBASIC13.55□□□□□ -0.24
RNF138Q8WVD3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 AL354877.1-201ENST00000424412 413 ntBASIC13.55□□□□□ -0.24
RNF138Q8WVD3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 GOLGA2P4-201ENST00000441462 777 ntBASIC13.55□□□□□ -0.24
RNF138Q8WVD3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 AC010328.2-201ENST00000597698 1111 ntBASIC13.55□□□□□ -0.24
RNF138Q8WVD3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 MTHFR-210ENST00000641407 2387 ntBASIC13.55□□□□□ -0.24
RNF138Q8WVD3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 SHC1P1-201ENST00000425230 1745 ntBASIC13.55□□□□□ -0.24
RNF138Q8WVD3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
RNF138Q8WVD3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 TPT1P11-201ENST00000458482 498 ntBASIC13.54□□□□□ -0.24
RNF138Q8WVD3 RPSAP36-202ENST00000494591 1261 ntBASIC13.54□□□□□ -0.24
RNF138Q8WVD3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 MIR4741-201ENST00000579822 90 ntBASIC13.54□□□□□ -0.24
RNF138Q8WVD3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 AC139712.1-201ENST00000378256 1875 ntBASIC13.54□□□□□ -0.24
RNF138Q8WVD3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 AL136172.1-201ENST00000598590 1394 ntBASIC13.54□□□□□ -0.24
RNF138Q8WVD3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNF138Q8WVD3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms