Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC21.69■■□□□ 1.06
ARHGEF40Q8TER5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARHGEF40Q8TER5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC21.69■■□□□ 1.06
ARHGEF40Q8TER5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARHGEF40Q8TER5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARHGEF40Q8TER5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ARHGEF40Q8TER5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 SNORA57-201ENST00000383870 149 ntBASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 NME2-201ENST00000393183 568 ntTSL 2 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 AC006529.1-201ENST00000459978 637 ntBASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 RN7SL147P-201ENST00000487345 298 ntBASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC21.68■■□□□ 1.06
ARHGEF40Q8TER5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 PCDHA12-202ENST00000613593 2588 ntBASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 AC092896.1-201ENST00000465850 380 ntBASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 ALG1L7P-201ENST00000502317 768 ntBASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 CASP3-205ENST00000517513 964 ntTSL 5 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 KRT18P37-201ENST00000520711 1282 ntBASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 AC023968.2-201ENST00000560593 1049 ntBASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 FZD10-202ENST00000539839 3282 ntBASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ARHGEF40Q8TER5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 SNX15-201ENST00000352068 771 ntTSL 5 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 AC092570.1-201ENST00000414446 469 ntBASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 AL133467.4-201ENST00000602953 725 ntBASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 AL160191.2-201ENST00000603975 601 ntBASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF40Q8TER5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms