Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 AC008735.3-201ENST00000596646 500 ntBASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 RPSAP52-203ENST00000622976 1023 ntBASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SMARCC2Q8TAQ2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 ACTG1P3-201ENST00000431775 1114 ntBASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 MIR5189-201ENST00000577370 114 ntBASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SMARCC2Q8TAQ2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 AL137783.1-201ENST00000623494 1896 ntBASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 OR8S1-201ENST00000310194 1080 ntBASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SMARCC2Q8TAQ2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms