Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.2□□□□□ -0.3
BEST4Q8NFU0 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 AC118758.2-201ENST00000614242 2813 ntBASIC13.19□□□□□ -0.3
BEST4Q8NFU0 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 HNRNPUP1-201ENST00000554987 333 ntBASIC13.19□□□□□ -0.3
BEST4Q8NFU0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 AC097359.3-201ENST00000603982 1210 ntBASIC13.19□□□□□ -0.3
BEST4Q8NFU0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 NUTM2HP-201ENST00000442076 2498 ntBASIC13.19□□□□□ -0.3
BEST4Q8NFU0 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BEST4Q8NFU0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 FAM220BP-201ENST00000377689 816 ntBASIC13.18□□□□□ -0.3
BEST4Q8NFU0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 AC074386.1-202ENST00000463561 864 ntBASIC13.18□□□□□ -0.3
BEST4Q8NFU0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 Z83851.2-201ENST00000609564 659 ntBASIC13.18□□□□□ -0.3
BEST4Q8NFU0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
BEST4Q8NFU0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms