Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PIK3C3Q8NEB9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 CICP17-201ENST00000418553 2377 ntBASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 AP001267.2-201ENST00000532619 2086 ntBASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 GPS2P2-201ENST00000430745 888 ntBASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 TARDBPP1-201ENST00000442013 1203 ntBASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 AC026150.2-201ENST00000564693 1156 ntBASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 AP001160.2-201ENST00000596071 487 ntBASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 AP001059.3-201ENST00000619053 235 ntBASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.31□□□□□ -0.12
PIK3C3Q8NEB9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 TCAF1P1-201ENST00000414990 2232 ntBASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 TSEN15P1-201ENST00000423257 515 ntBASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 SPDYE14P-201ENST00000442619 822 ntBASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 AC027612.4-201ENST00000605371 583 ntBASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PIK3C3Q8NEB9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms