Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 AP000593.2-201ENST00000542775 1433 ntBASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 AC055811.4-201ENST00000624039 1754 ntBASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 AC104457.1-201ENST00000401024 814 ntBASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 FAM58BP-201ENST00000439056 645 ntBASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 MARK2P5-201ENST00000507649 634 ntBASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 FGFR3P5-201ENST00000564496 886 ntBASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 AC008132.1-202ENST00000342005 1389 ntBASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.35■□□□□ 0.05
SYNPOQ8N3V7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 AC007274.2-201ENST00000421675 662 ntBASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 AC005324.6-201ENST00000587972 613 ntBASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 AC079336.7-201ENST00000623428 1078 ntBASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 AC073347.1-201ENST00000421633 2643 ntBASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SYNPOQ8N3V7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms