Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC170Q8IYT3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 TEX28P1-201ENST00000613479 1221 ntBASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 TEX28P2-201ENST00000617764 1221 ntBASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 AL109936.8-201ENST00000641772 604 ntBASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC170Q8IYT3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 GAPDHP40-201ENST00000505218 1006 ntBASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 AC004461.2-201ENST00000629517 803 ntBASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 ST20-AS1-201ENST00000560255 4223 ntBASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 AGGF1P1-201ENST00000509500 2073 ntBASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 AC011474.4-201ENST00000623523 2076 ntBASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.31■□□□□ 0.2
CCDC170Q8IYT3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC170Q8IYT3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC170Q8IYT3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms