Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 AC005229.1-201ENST00000392885 409 ntBASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 AC106760.1-201ENST00000508690 800 ntBASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 DUX4L47-201ENST00000566374 394 ntBASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 AC055811.4-201ENST00000624039 1754 ntBASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCUBE3Q8IX30 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 ARL4AP4-201ENST00000434170 518 ntBASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 AC233724.13-201ENST00000598383 410 ntBASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 AL162274.1-201ENST00000617191 1098 ntBASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 AC018665.1-201ENST00000622927 1362 ntBASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.96■□□□□ 0.15
SCUBE3Q8IX30 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SCUBE3Q8IX30 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SCUBE3Q8IX30 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SCUBE3Q8IX30 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms