Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 LRRC59-203ENST00000576448 1531 ntBASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM48Q8IWZ4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 RNU1-114P-201ENST00000365297 166 ntBASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 AC114812.1-204ENST00000449669 728 ntBASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 SAMD11P1-201ENST00000571429 661 ntBASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 MIR6775-201ENST00000617557 69 ntBASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 COX11-210ENST00000639671 696 ntBASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM48Q8IWZ4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 AC090616.6-203ENST00000579186 1945 ntBASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 AC092933.1-201ENST00000393644 945 ntBASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 AL645937.2-201ENST00000396808 931 ntBASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 KLF2P2-201ENST00000416807 1039 ntBASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 SNX29P1-201ENST00000548357 1007 ntBASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM48Q8IWZ4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms