Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF550Q7Z398 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AL360270.3-201ENST00000609118 1348 ntBASIC14.02□□□□□ -0.17
ZNF550Q7Z398 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC087499.6-201ENST00000411576 835 ntBASIC14.02□□□□□ -0.17
ZNF550Q7Z398 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC026410.3-201ENST00000514280 936 ntBASIC14.02□□□□□ -0.17
ZNF550Q7Z398 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 CR383656.12-201ENST00000549567 513 ntBASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC023310.3-201ENST00000557027 670 ntBASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC100756.1-201ENST00000562736 682 ntBASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC138749.3-201ENST00000567691 622 ntBASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC093813.1-201ENST00000605066 256 ntBASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC116165.1-201ENST00000611806 668 ntBASIC14.02□□□□□ -0.17
ZNF550Q7Z398 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF550Q7Z398 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 NUS1P3-201ENST00000423502 862 ntBASIC14.01□□□□□ -0.17
ZNF550Q7Z398 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 AC104596.2-201ENST00000512793 793 ntBASIC14.01□□□□□ -0.17
ZNF550Q7Z398 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 AC107373.2-201ENST00000607735 490 ntBASIC14.01□□□□□ -0.17
ZNF550Q7Z398 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF550Q7Z398 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms