Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC004449.1-201ENST00000564240 433 ntBASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC011467.4-201ENST00000594891 528 ntBASIC13.36□□□□□ -0.27
C11orf88Q6PI97 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC026120.1-201ENST00000611536 926 ntBASIC13.36□□□□□ -0.27
C11orf88Q6PI97 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC023024.2-201ENST00000623561 1993 ntBASIC13.36□□□□□ -0.27
C11orf88Q6PI97 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AKAP8P1-201ENST00000434743 1349 ntBASIC13.36□□□□□ -0.27
C11orf88Q6PI97 AC009090.5-201ENST00000624886 2285 ntBASIC13.36□□□□□ -0.27
C11orf88Q6PI97 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
C11orf88Q6PI97 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.35□□□□□ -0.27
C11orf88Q6PI97 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 OR2I1P-208ENST00000641137 4948 ntBASIC13.35□□□□□ -0.27
C11orf88Q6PI97 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
C11orf88Q6PI97 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 AC004461.1-201ENST00000412461 403 ntBASIC13.34□□□□□ -0.27
C11orf88Q6PI97 PMS2P4-201ENST00000412466 1052 ntBASIC13.34□□□□□ -0.27
C11orf88Q6PI97 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
C11orf88Q6PI97 SPDYE11-202ENST00000450699 704 ntBASIC13.34□□□□□ -0.27
C11orf88Q6PI97 HLA-J-203ENST00000494367 1087 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms