Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC073957.3-201ENST00000609998 6758 ntBASIC11.52□□□□□ -0.57
MRPL54Q6P161 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
MRPL54Q6P161 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.52□□□□□ -0.57
MRPL54Q6P161 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.52□□□□□ -0.57
MRPL54Q6P161 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
MRPL54Q6P161 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.52□□□□□ -0.57
MRPL54Q6P161 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
MRPL54Q6P161 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.52□□□□□ -0.57
MRPL54Q6P161 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL54Q6P161 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
MRPL54Q6P161 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.51□□□□□ -0.57
MRPL54Q6P161 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 DUSP5P1-201ENST00000441325 1139 ntBASIC11.51□□□□□ -0.57
MRPL54Q6P161 AP002383.4-201ENST00000442518 975 ntBASIC11.51□□□□□ -0.57
MRPL54Q6P161 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 AC006557.2-201ENST00000592985 1240 ntBASIC11.51□□□□□ -0.57
MRPL54Q6P161 MTDHP3-201ENST00000594186 672 ntBASIC11.51□□□□□ -0.57
MRPL54Q6P161 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.51□□□□□ -0.57
MRPL54Q6P161 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 AL591122.2-201ENST00000624125 1853 ntBASIC11.51□□□□□ -0.57
MRPL54Q6P161 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
MRPL54Q6P161 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms