Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF43Q68DV7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF43Q68DV7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RNF43Q68DV7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
RNF43Q68DV7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RNF43Q68DV7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 TUBB1P2-201ENST00000422712 1306 ntBASIC15.95■□□□□ 0.14
RNF43Q68DV7 TUBB1P1-201ENST00000503144 1300 ntBASIC15.95■□□□□ 0.14
RNF43Q68DV7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 AC099548.2-209ENST00000480264 625 ntBASIC15.95■□□□□ 0.14
RNF43Q68DV7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.95■□□□□ 0.14
RNF43Q68DV7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RNF43Q68DV7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF43Q68DV7 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.95■□□□□ 0.14
RNF43Q68DV7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 PDIA3P1-201ENST00000471856 1510 ntBASIC15.94■□□□□ 0.14
RNF43Q68DV7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 ACKR1-201ENST00000368121 1240 ntBASIC15.94■□□□□ 0.14
RNF43Q68DV7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 AC092506.1-202ENST00000401022 528 ntBASIC15.94■□□□□ 0.14
RNF43Q68DV7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF43Q68DV7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
RNF43Q68DV7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
RNF43Q68DV7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms