Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 FOXO1B-201ENST00000504678 1527 ntBASIC14.35□□□□□ -0.11
LPCAT4Q643R3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LPCAT4Q643R3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 OR7E14P-202ENST00000530490 1290 ntBASIC14.34□□□□□ -0.11
LPCAT4Q643R3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.34□□□□□ -0.11
LPCAT4Q643R3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.33□□□□□ -0.11
LPCAT4Q643R3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 AZGP1P1-201ENST00000411909 902 ntBASIC14.33□□□□□ -0.12
LPCAT4Q643R3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 AL138918.1-201ENST00000568306 659 ntBASIC14.33□□□□□ -0.12
LPCAT4Q643R3 AL445228.2-201ENST00000605589 952 ntBASIC14.33□□□□□ -0.12
LPCAT4Q643R3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 REXO1L6P-202ENST00000619970 1078 ntBASIC14.33□□□□□ -0.12
LPCAT4Q643R3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LPCAT4Q643R3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms