Protein–RNA interactions for Protein: Q5VV41

ARHGEF16, Rho guanine nucleotide exchange factor 16, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16Q5VV41 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 REXO1L2P-201ENST00000425429 2069 ntBASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARHGEF16Q5VV41 NORAD-201ENST00000565493 5339 ntBASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.08■□□□□ 0.33
ARHGEF16Q5VV41 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 RN7SKP175-201ENST00000408472 289 ntBASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 BCYRN1-201ENST00000418539 200 ntBASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 AC138696.2-201ENST00000607376 223 ntBASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARHGEF16Q5VV41 AC020910.5-201ENST00000623668 1865 ntBASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 AC011840.2-201ENST00000563063 1520 ntBASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 AC007663.3-201ENST00000609632 465 ntBASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 AC244452.3-201ENST00000636814 210 ntBASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 AC002472.3-201ENST00000640124 621 ntBASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 AL162727.3-201ENST00000635661 2787 ntBASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.07■□□□□ 0.32
ARHGEF16Q5VV41 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF16Q5VV41 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF16Q5VV41 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ARHGEF16Q5VV41 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms