Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 RN7SKP175-201ENST00000408472 289 ntBASIC19.62■□□□□ 0.73
CCDC27Q2M243 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 RHOXF1P1-202ENST00000635473 501 ntBASIC19.62■□□□□ 0.73
CCDC27Q2M243 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC27Q2M243 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC27Q2M243 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 FKBP4P6-201ENST00000457486 1332 ntBASIC19.61■□□□□ 0.73
CCDC27Q2M243 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 ANKRD19P-201ENST00000338192 862 ntBASIC19.61■□□□□ 0.73
CCDC27Q2M243 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 AC138951.2-201ENST00000623455 1161 ntBASIC19.61■□□□□ 0.73
CCDC27Q2M243 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.61■□□□□ 0.73
CCDC27Q2M243 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC27Q2M243 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC27Q2M243 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 MIR1909-201ENST00000411312 80 ntBASIC19.6■□□□□ 0.73
CCDC27Q2M243 ACA64.2-201ENST00000459014 129 ntBASIC19.6■□□□□ 0.73
CCDC27Q2M243 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 AC007292.2-201ENST00000593524 1812 ntBASIC19.6■□□□□ 0.73
CCDC27Q2M243 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC27Q2M243 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC27Q2M243 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms