Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.33□□□□□ -0.27
DEFA3P59666 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
DEFA3P59666 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.33□□□□□ -0.27
DEFA3P59666 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
DEFA3P59666 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.33□□□□□ -0.27
DEFA3P59666 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DEFA3P59666 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
DEFA3P59666 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
DEFA3P59666 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 AL691432.1-201ENST00000596308 1422 ntBASIC13.33□□□□□ -0.28
DEFA3P59666 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA3P59666 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
DEFA3P59666 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.33□□□□□ -0.28
DEFA3P59666 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
DEFA3P59666 PMS2P4-201ENST00000412466 1052 ntBASIC13.33□□□□□ -0.28
DEFA3P59666 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 AC096582.2-201ENST00000510860 516 ntBASIC13.33□□□□□ -0.28
DEFA3P59666 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA3P59666 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA3P59666 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
DEFA3P59666 AL589182.2-201ENST00000619332 1049 ntBASIC13.33□□□□□ -0.28
DEFA3P59666 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA3P59666 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA3P59666 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA3P59666 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
DEFA3P59666 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.33□□□□□ -0.28
DEFA3P59666 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
DEFA3P59666 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA3P59666 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
DEFA3P59666 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
DEFA3P59666 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA3P59666 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA3P59666 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA3P59666 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
DEFA3P59666 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 AC012508.2-201ENST00000567613 1472 ntBASIC13.32□□□□□ -0.28
DEFA3P59666 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 RNU1-129P-201ENST00000384064 167 ntBASIC13.32□□□□□ -0.28
DEFA3P59666 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA3P59666 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 ABCD1P5-201ENST00000445663 754 ntBASIC13.32□□□□□ -0.28
DEFA3P59666 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.32□□□□□ -0.28
DEFA3P59666 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 U1.21-201ENST00000580816 167 ntBASIC13.32□□□□□ -0.28
DEFA3P59666 AL031055.1-201ENST00000606362 631 ntBASIC13.32□□□□□ -0.28
DEFA3P59666 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.32□□□□□ -0.28
DEFA3P59666 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA3P59666 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA3P59666 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA3P59666 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
DEFA3P59666 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA3P59666 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA3P59666 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA3P59666 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms