Protein–RNA interactions for Protein: P58557

YBEY, Endoribonuclease YbeY, humanhuman

Predicted RBP Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBEYP58557 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
YBEYP58557 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
YBEYP58557 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBEYP58557 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.41■□□□□ 0.06
YBEYP58557 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.4■□□□□ 0.06
YBEYP58557 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.4■□□□□ 0.06
YBEYP58557 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.4■□□□□ 0.06
YBEYP58557 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
YBEYP58557 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.4■□□□□ 0.06
YBEYP58557 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.4■□□□□ 0.06
YBEYP58557 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
YBEYP58557 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.4■□□□□ 0.06
YBEYP58557 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
YBEYP58557 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
YBEYP58557 AC078819.1-201ENST00000547454 765 ntBASIC15.4■□□□□ 0.06
YBEYP58557 AC012085.1-201ENST00000548270 765 ntBASIC15.4■□□□□ 0.06
YBEYP58557 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.4■□□□□ 0.06
YBEYP58557 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.4■□□□□ 0.06
YBEYP58557 AC138466.3-201ENST00000619983 221 ntBASIC15.4■□□□□ 0.06
YBEYP58557 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.4■□□□□ 0.06
YBEYP58557 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
YBEYP58557 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
YBEYP58557 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.4■□□□□ 0.06
YBEYP58557 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
YBEYP58557 CLUHP2-201ENST00000426660 1303 ntBASIC15.4■□□□□ 0.06
YBEYP58557 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.4■□□□□ 0.06
YBEYP58557 AC013726.1-201ENST00000563747 2285 ntBASIC15.4■□□□□ 0.06
YBEYP58557 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBEYP58557 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.39■□□□□ 0.05
YBEYP58557 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
YBEYP58557 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.39■□□□□ 0.05
YBEYP58557 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
YBEYP58557 MIR1909-201ENST00000411312 80 ntBASIC15.39■□□□□ 0.05
YBEYP58557 AC007969.1-201ENST00000433675 447 ntBASIC15.39■□□□□ 0.05
YBEYP58557 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.39■□□□□ 0.05
YBEYP58557 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.39■□□□□ 0.05
YBEYP58557 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.39■□□□□ 0.05
YBEYP58557 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.39■□□□□ 0.05
YBEYP58557 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.39■□□□□ 0.05
YBEYP58557 AC104989.1-201ENST00000519711 778 ntBASIC15.39■□□□□ 0.05
YBEYP58557 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.39■□□□□ 0.05
YBEYP58557 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.39■□□□□ 0.05
YBEYP58557 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.39■□□□□ 0.05
YBEYP58557 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.39■□□□□ 0.05
YBEYP58557 AC138951.2-201ENST00000623455 1161 ntBASIC15.39■□□□□ 0.05
YBEYP58557 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 LINC01101-201ENST00000622953 1884 ntBASIC15.39■□□□□ 0.05
YBEYP58557 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 FLJ16779-201ENST00000612722 7638 ntBASIC15.39■□□□□ 0.05
YBEYP58557 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
YBEYP58557 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
YBEYP58557 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms