Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RIPPLY3P57055 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RIPPLY3P57055 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RIPPLY3P57055 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RIPPLY3P57055 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RIPPLY3P57055 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RIPPLY3P57055 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RIPPLY3P57055 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RIPPLY3P57055 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RIPPLY3P57055 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RIPPLY3P57055 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 HIST3H2BA-201ENST00000436555 524 ntBASIC12.66□□□□□ -0.38
RIPPLY3P57055 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 AC010900.1-201ENST00000449849 1296 ntBASIC12.66□□□□□ -0.38
RIPPLY3P57055 AC244197.1-201ENST00000456494 951 ntBASIC12.66□□□□□ -0.38
RIPPLY3P57055 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 AC021723.1-201ENST00000486306 515 ntBASIC12.66□□□□□ -0.38
RIPPLY3P57055 AC023906.1-201ENST00000486386 453 ntBASIC12.66□□□□□ -0.38
RIPPLY3P57055 FAM86B3P-203ENST00000523992 854 ntBASIC12.66□□□□□ -0.38
RIPPLY3P57055 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 AL138709.1-201ENST00000614840 1693 ntBASIC12.66□□□□□ -0.38
RIPPLY3P57055 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 KRT8P29-201ENST00000420409 1371 ntBASIC12.66□□□□□ -0.38
RIPPLY3P57055 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.66□□□□□ -0.38
RIPPLY3P57055 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RIPPLY3P57055 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RIPPLY3P57055 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
RIPPLY3P57055 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms