Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.35□□□□□ -0.11
WNT3P56703 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.35□□□□□ -0.11
WNT3P56703 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
WNT3P56703 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.35□□□□□ -0.11
WNT3P56703 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 AL354702.1-201ENST00000442006 1960 ntBASIC14.34□□□□□ -0.11
WNT3P56703 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.34□□□□□ -0.11
WNT3P56703 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
WNT3P56703 AL645937.2-201ENST00000396808 931 ntBASIC14.34□□□□□ -0.11
WNT3P56703 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.34□□□□□ -0.11
WNT3P56703 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 VDAC1P7-201ENST00000462417 847 ntBASIC14.34□□□□□ -0.11
WNT3P56703 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
WNT3P56703 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 AC036164.1-201ENST00000570544 333 ntBASIC14.34□□□□□ -0.11
WNT3P56703 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
WNT3P56703 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.34□□□□□ -0.11
WNT3P56703 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
WNT3P56703 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.33□□□□□ -0.11
WNT3P56703 LINC01230-201ENST00000625222 3017 ntBASIC14.33□□□□□ -0.11
WNT3P56703 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.33□□□□□ -0.11
WNT3P56703 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.33□□□□□ -0.11
WNT3P56703 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.33□□□□□ -0.11
WNT3P56703 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
WNT3P56703 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3P56703 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
WNT3P56703 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
WNT3P56703 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.33□□□□□ -0.12
WNT3P56703 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3P56703 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3P56703 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3P56703 COX5BP8-201ENST00000416911 349 ntBASIC14.33□□□□□ -0.12
WNT3P56703 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3P56703 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.33□□□□□ -0.12
WNT3P56703 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.33□□□□□ -0.12
WNT3P56703 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.33□□□□□ -0.12
WNT3P56703 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.33□□□□□ -0.12
WNT3P56703 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.33□□□□□ -0.12
WNT3P56703 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
WNT3P56703 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3P56703 AC027307.3-201ENST00000594262 1100 ntBASIC14.33□□□□□ -0.12
WNT3P56703 AC008494.3-201ENST00000606615 944 ntBASIC14.33□□□□□ -0.12
WNT3P56703 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
WNT3P56703 PRSS30P-206ENST00000641773 873 ntBASIC14.33□□□□□ -0.12
WNT3P56703 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.33□□□□□ -0.12
WNT3P56703 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
WNT3P56703 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms