Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SUMO3P55854 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SUMO3P55854 AC092933.1-201ENST00000393644 945 ntBASIC13.71□□□□□ -0.21
SUMO3P55854 AC007969.1-201ENST00000433675 447 ntBASIC13.71□□□□□ -0.21
SUMO3P55854 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.71□□□□□ -0.21
SUMO3P55854 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
SUMO3P55854 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
SUMO3P55854 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.71□□□□□ -0.21
SUMO3P55854 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.71□□□□□ -0.21
SUMO3P55854 AC106886.1-201ENST00000568660 600 ntBASIC13.71□□□□□ -0.21
SUMO3P55854 GNRHR2-203ENST00000581100 1187 ntBASIC13.71□□□□□ -0.21
SUMO3P55854 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.71□□□□□ -0.21
SUMO3P55854 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
SUMO3P55854 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.71□□□□□ -0.21
SUMO3P55854 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.71□□□□□ -0.21
SUMO3P55854 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SUMO3P55854 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SUMO3P55854 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SUMO3P55854 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SUMO3P55854 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SUMO3P55854 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SUMO3P55854 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SUMO3P55854 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SUMO3P55854 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SUMO3P55854 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SUMO3P55854 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 AC018442.1-201ENST00000421439 2061 ntBASIC13.7□□□□□ -0.22
SUMO3P55854 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.7□□□□□ -0.22
SUMO3P55854 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.7□□□□□ -0.22
SUMO3P55854 BOLA2P3-201ENST00000404566 256 ntBASIC13.7□□□□□ -0.22
SUMO3P55854 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SUMO3P55854 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SUMO3P55854 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.7□□□□□ -0.22
SUMO3P55854 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.7□□□□□ -0.22
SUMO3P55854 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.7□□□□□ -0.22
SUMO3P55854 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.7□□□□□ -0.22
SUMO3P55854 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SUMO3P55854 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.7□□□□□ -0.22
SUMO3P55854 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.7□□□□□ -0.22
SUMO3P55854 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.7□□□□□ -0.22
SUMO3P55854 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SUMO3P55854 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.7□□□□□ -0.22
SUMO3P55854 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SUMO3P55854 DBET-201ENST00000630918 3363 ntBASIC13.69□□□□□ -0.22
SUMO3P55854 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.69□□□□□ -0.22
SUMO3P55854 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SUMO3P55854 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.69□□□□□ -0.22
SUMO3P55854 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 TPM3P8-201ENST00000330554 643 ntBASIC13.69□□□□□ -0.22
SUMO3P55854 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.69□□□□□ -0.22
SUMO3P55854 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 POM121L8P-201ENST00000417732 1281 ntBASIC13.69□□□□□ -0.22
SUMO3P55854 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.69□□□□□ -0.22
SUMO3P55854 TMEM14DP-201ENST00000422205 345 ntBASIC13.69□□□□□ -0.22
SUMO3P55854 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.69□□□□□ -0.22
SUMO3P55854 AC016694.1-201ENST00000434179 700 ntBASIC13.69□□□□□ -0.22
SUMO3P55854 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SUMO3P55854 POM121L9P-203ENST00000441984 1285 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms