Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
PKNOX1P55347 TUBB3P1-201ENST00000405796 1332 ntBASIC14.95□□□□□ -0.02
PKNOX1P55347 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PKNOX1P55347 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
PKNOX1P55347 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.95□□□□□ -0.02
PKNOX1P55347 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PKNOX1P55347 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.95□□□□□ -0.02
PKNOX1P55347 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.95□□□□□ -0.02
PKNOX1P55347 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.95□□□□□ -0.02
PKNOX1P55347 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PKNOX1P55347 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
PKNOX1P55347 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.95□□□□□ -0.02
PKNOX1P55347 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 AC000095.1-201ENST00000603208 874 ntBASIC14.95□□□□□ -0.02
PKNOX1P55347 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
PKNOX1P55347 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.95□□□□□ -0.02
PKNOX1P55347 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.95□□□□□ -0.02
PKNOX1P55347 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PKNOX1P55347 AC136759.1-202ENST00000530858 2194 ntBASIC14.95□□□□□ -0.02
PKNOX1P55347 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PKNOX1P55347 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PKNOX1P55347 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.95□□□□□ -0.02
PKNOX1P55347 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.95□□□□□ -0.02
PKNOX1P55347 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PKNOX1P55347 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.94□□□□□ -0.02
PKNOX1P55347 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PKNOX1P55347 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 HSPA7-201ENST00000445535 1927 ntBASIC14.94□□□□□ -0.02
PKNOX1P55347 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PKNOX1P55347 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.94□□□□□ -0.02
PKNOX1P55347 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.94□□□□□ -0.02
PKNOX1P55347 TSEN15P1-201ENST00000423257 515 ntBASIC14.94□□□□□ -0.02
PKNOX1P55347 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.94□□□□□ -0.02
PKNOX1P55347 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.94□□□□□ -0.02
PKNOX1P55347 AC069120.2-201ENST00000524091 540 ntBASIC14.94□□□□□ -0.02
PKNOX1P55347 ZNF890P-202ENST00000530367 1156 ntBASIC14.94□□□□□ -0.02
PKNOX1P55347 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.94□□□□□ -0.02
PKNOX1P55347 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.94□□□□□ -0.02
PKNOX1P55347 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.94□□□□□ -0.02
PKNOX1P55347 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.94□□□□□ -0.02
PKNOX1P55347 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PKNOX1P55347 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.94□□□□□ -0.02
PKNOX1P55347 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 Z92544.3-201ENST00000624747 417 ntBASIC14.94□□□□□ -0.02
PKNOX1P55347 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.94□□□□□ -0.02
PKNOX1P55347 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PKNOX1P55347 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
PKNOX1P55347 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PKNOX1P55347 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PKNOX1P55347 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
PKNOX1P55347 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms