Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 AC003102.2-201ENST00000589195 1469 ntBASIC19.26■□□□□ 0.67
BRPF1P55201 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.26■□□□□ 0.67
BRPF1P55201 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.26■□□□□ 0.67
BRPF1P55201 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRPF1P55201 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BRPF1P55201 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BRPF1P55201 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.25■□□□□ 0.67
BRPF1P55201 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 FAM45BP-202ENST00000592932 1624 ntBASIC19.25■□□□□ 0.67
BRPF1P55201 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BRPF1P55201 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
BRPF1P55201 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.25■□□□□ 0.67
BRPF1P55201 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.25■□□□□ 0.67
BRPF1P55201 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.25■□□□□ 0.67
BRPF1P55201 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BRPF1P55201 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.25■□□□□ 0.67
BRPF1P55201 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.25■□□□□ 0.67
BRPF1P55201 AC108725.1-201ENST00000495472 409 ntBASIC19.25■□□□□ 0.67
BRPF1P55201 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.25■□□□□ 0.67
BRPF1P55201 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.25■□□□□ 0.67
BRPF1P55201 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC19.25■□□□□ 0.67
BRPF1P55201 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRPF1P55201 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 AC018529.2-202ENST00000611482 3087 ntBASIC19.25■□□□□ 0.67
BRPF1P55201 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.25■□□□□ 0.67
BRPF1P55201 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRPF1P55201 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.24■□□□□ 0.67
BRPF1P55201 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC19.24■□□□□ 0.67
BRPF1P55201 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BRPF1P55201 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 RN7SKP230-201ENST00000365642 335 ntBASIC19.24■□□□□ 0.67
BRPF1P55201 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.24■□□□□ 0.67
BRPF1P55201 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.24■□□□□ 0.67
BRPF1P55201 CTBP2P5-201ENST00000454986 1264 ntBASIC19.24■□□□□ 0.67
BRPF1P55201 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.24■□□□□ 0.67
BRPF1P55201 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.24■□□□□ 0.67
BRPF1P55201 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
BRPF1P55201 ENPP7P14-201ENST00000621765 1040 ntBASIC19.24■□□□□ 0.67
BRPF1P55201 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.24■□□□□ 0.67
BRPF1P55201 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
BRPF1P55201 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BRPF1P55201 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.24■□□□□ 0.67
BRPF1P55201 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
BRPF1P55201 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.24■□□□□ 0.67
BRPF1P55201 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRPF1P55201 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRPF1P55201 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRPF1P55201 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRPF1P55201 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRPF1P55201 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRPF1P55201 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
BRPF1P55201 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRPF1P55201 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRPF1P55201 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRPF1P55201 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.23■□□□□ 0.67
BRPF1P55201 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.23■□□□□ 0.67
BRPF1P55201 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms