Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF144AP50876 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF144AP50876 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF144AP50876 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF144AP50876 AC007541.1-201ENST00000570282 1469 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RNF144AP50876 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RNF144AP50876 ACE3P-201ENST00000423435 1973 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 SBF1P1-201ENST00000444527 5631 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF144AP50876 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 RPL5P21-201ENST00000404620 815 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 AC098850.1-201ENST00000419919 790 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF144AP50876 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RNF144AP50876 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF144AP50876 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 AC036164.1-201ENST00000570544 333 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF144AP50876 AL132655.2-201ENST00000596276 594 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 AL049840.4-201ENST00000602422 811 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 AC004233.3-201ENST00000607794 1269 ntBASIC14.18□□□□□ -0.14
RNF144AP50876 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF144AP50876 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
RNF144AP50876 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RNF144AP50876 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
RNF144AP50876 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF144AP50876 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 ZBED1P1-201ENST00000502364 1930 ntBASIC14.17□□□□□ -0.14
RNF144AP50876 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF144AP50876 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RNF144AP50876 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 SPTLC1P1-201ENST00000447199 261 ntBASIC14.17□□□□□ -0.14
RNF144AP50876 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF144AP50876 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms