Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPFP49454 KRT18P36-201ENST00000411618 1276 ntBASIC16.65■□□□□ 0.26
CENPFP49454 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.65■□□□□ 0.26
CENPFP49454 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.65■□□□□ 0.26
CENPFP49454 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.65■□□□□ 0.26
CENPFP49454 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CENPFP49454 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
CENPFP49454 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CENPFP49454 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CENPFP49454 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CENPFP49454 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CENPFP49454 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CENPFP49454 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.26
CENPFP49454 AL645933.1-201ENST00000440087 609 ntBASIC16.64■□□□□ 0.26
CENPFP49454 AC093826.1-201ENST00000508655 993 ntBASIC16.64■□□□□ 0.26
CENPFP49454 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CENPFP49454 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CENPFP49454 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CENPFP49454 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CENPFP49454 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPFP49454 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CENPFP49454 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPFP49454 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 BAK1P1-201ENST00000317045 636 ntBASIC16.64■□□□□ 0.25
CENPFP49454 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 AC106827.1-201ENST00000366454 431 ntBASIC16.64■□□□□ 0.25
CENPFP49454 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPFP49454 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 RN7SL494P-201ENST00000461517 304 ntBASIC16.64■□□□□ 0.25
CENPFP49454 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPFP49454 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.64■□□□□ 0.25
CENPFP49454 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.64■□□□□ 0.25
CENPFP49454 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 AC004554.1-201ENST00000422830 1468 ntBASIC16.64■□□□□ 0.25
CENPFP49454 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPFP49454 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CENPFP49454 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CENPFP49454 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.64■□□□□ 0.25
CENPFP49454 MIR6720-201ENST00000611664 98 ntBASIC16.64■□□□□ 0.25
CENPFP49454 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.64■□□□□ 0.25
CENPFP49454 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.64■□□□□ 0.25
CENPFP49454 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CENPFP49454 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CENPFP49454 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.63■□□□□ 0.25
CENPFP49454 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.63■□□□□ 0.25
CENPFP49454 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CENPFP49454 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC16.63■□□□□ 0.25
CENPFP49454 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.63■□□□□ 0.25
CENPFP49454 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.63■□□□□ 0.25
CENPFP49454 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CENPFP49454 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.63■□□□□ 0.25
CENPFP49454 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 MARK2P16-201ENST00000605714 1723 ntBASIC16.63■□□□□ 0.25
CENPFP49454 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.63■□□□□ 0.25
CENPFP49454 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.63■□□□□ 0.25
CENPFP49454 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CENPFP49454 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 AC106047.2-201ENST00000511723 743 ntBASIC16.63■□□□□ 0.25
CENPFP49454 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CENPFP49454 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CENPFP49454 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CENPFP49454 MIR4472-1-201ENST00000584349 80 ntBASIC16.63■□□□□ 0.25
CENPFP49454 AC021016.3-201ENST00000608367 477 ntBASIC16.63■□□□□ 0.25
CENPFP49454 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.63■□□□□ 0.25
CENPFP49454 CR392039.1-201ENST00000623217 204 ntBASIC16.63■□□□□ 0.25
CENPFP49454 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CENPFP49454 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CENPFP49454 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms