Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.78■□□□□ 0.44
NEDD4P46934 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.78■□□□□ 0.44
NEDD4P46934 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.78■□□□□ 0.44
NEDD4P46934 AC106820.3-201ENST00000561653 397 ntBASIC17.78■□□□□ 0.44
NEDD4P46934 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.78■□□□□ 0.44
NEDD4P46934 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.78■□□□□ 0.44
NEDD4P46934 AC006453.4-201ENST00000636949 1252 ntBASIC17.78■□□□□ 0.44
NEDD4P46934 COX11-210ENST00000639671 696 ntBASIC17.78■□□□□ 0.44
NEDD4P46934 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NEDD4P46934 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NEDD4P46934 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.78■□□□□ 0.44
NEDD4P46934 FGD5P1-202ENST00000614866 2498 ntBASIC17.78■□□□□ 0.44
NEDD4P46934 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 AC011840.2-201ENST00000563063 1520 ntBASIC17.78■□□□□ 0.44
NEDD4P46934 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.78■□□□□ 0.44
NEDD4P46934 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.78■□□□□ 0.44
NEDD4P46934 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NEDD4P46934 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
NEDD4P46934 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.77■□□□□ 0.44
NEDD4P46934 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.77■□□□□ 0.44
NEDD4P46934 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.77■□□□□ 0.44
NEDD4P46934 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.77■□□□□ 0.44
NEDD4P46934 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.77■□□□□ 0.44
NEDD4P46934 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.77■□□□□ 0.44
NEDD4P46934 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 KRT223P-202ENST00000449164 1292 ntBASIC17.77■□□□□ 0.44
NEDD4P46934 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 MESTP3-201ENST00000503460 968 ntBASIC17.77■□□□□ 0.44
NEDD4P46934 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.77■□□□□ 0.44
NEDD4P46934 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.77■□□□□ 0.44
NEDD4P46934 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 LINC01101-201ENST00000622953 1884 ntBASIC17.77■□□□□ 0.44
NEDD4P46934 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NEDD4P46934 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 AC018529.2-202ENST00000611482 3087 ntBASIC17.77■□□□□ 0.44
NEDD4P46934 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NEDD4P46934 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NEDD4P46934 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.77■□□□□ 0.44
NEDD4P46934 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.77■□□□□ 0.43
NEDD4P46934 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NEDD4P46934 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
NEDD4P46934 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.77■□□□□ 0.43
NEDD4P46934 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NEDD4P46934 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
NEDD4P46934 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NEDD4P46934 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.77■□□□□ 0.43
NEDD4P46934 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.76■□□□□ 0.43
NEDD4P46934 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NEDD4P46934 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.76■□□□□ 0.43
NEDD4P46934 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.76■□□□□ 0.43
NEDD4P46934 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NEDD4P46934 MIR1202-201ENST00000408529 83 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.76■□□□□ 0.43
NEDD4P46934 HLA-V-201ENST00000429037 534 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.76■□□□□ 0.43
NEDD4P46934 BNIP3P42-201ENST00000454982 569 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.76■□□□□ 0.43
NEDD4P46934 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.76■□□□□ 0.43
NEDD4P46934 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.76■□□□□ 0.43
NEDD4P46934 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 BNIP3P29-201ENST00000598302 571 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 OR10B1P-201ENST00000601666 907 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 AC138696.2-201ENST00000607376 223 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 AC011447.5-201ENST00000616168 564 ntBASIC17.76■□□□□ 0.43
NEDD4P46934 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.76■□□□□ 0.43
NEDD4P46934 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms