Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.26■□□□□ 0.35
COPB2P35606 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.26■□□□□ 0.35
COPB2P35606 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.26■□□□□ 0.35
COPB2P35606 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
COPB2P35606 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.26■□□□□ 0.35
COPB2P35606 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
COPB2P35606 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.26■□□□□ 0.35
COPB2P35606 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.26■□□□□ 0.35
COPB2P35606 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.26■□□□□ 0.35
COPB2P35606 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.26■□□□□ 0.35
COPB2P35606 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.26■□□□□ 0.35
COPB2P35606 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.26■□□□□ 0.35
COPB2P35606 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.26■□□□□ 0.35
COPB2P35606 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.26■□□□□ 0.35
COPB2P35606 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.26■□□□□ 0.35
COPB2P35606 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.26■□□□□ 0.35
COPB2P35606 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
COPB2P35606 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.26■□□□□ 0.35
COPB2P35606 BNIP3P13-201ENST00000599968 566 ntBASIC17.26■□□□□ 0.35
COPB2P35606 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.26■□□□□ 0.35
COPB2P35606 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.26■□□□□ 0.35
COPB2P35606 AC002472.3-201ENST00000640124 621 ntBASIC17.26■□□□□ 0.35
COPB2P35606 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPB2P35606 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.25■□□□□ 0.35
COPB2P35606 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.25■□□□□ 0.35
COPB2P35606 AC105250.1-201ENST00000509378 2057 ntBASIC17.25■□□□□ 0.35
COPB2P35606 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.25■□□□□ 0.35
COPB2P35606 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.25■□□□□ 0.35
COPB2P35606 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.25■□□□□ 0.35
COPB2P35606 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.25■□□□□ 0.35
COPB2P35606 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COPB2P35606 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
COPB2P35606 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 DPM3-202ENST00000368399 517 ntBASIC17.25■□□□□ 0.35
COPB2P35606 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 AC013355.1-201ENST00000562625 723 ntBASIC17.25■□□□□ 0.35
COPB2P35606 RN7SL163P-201ENST00000583100 276 ntBASIC17.25■□□□□ 0.35
COPB2P35606 AC138696.2-201ENST00000607376 223 ntBASIC17.25■□□□□ 0.35
COPB2P35606 AL136301.1-201ENST00000615830 422 ntBASIC17.25■□□□□ 0.35
COPB2P35606 AC091812.3-201ENST00000621362 345 ntBASIC17.25■□□□□ 0.35
COPB2P35606 CU633904.3-201ENST00000624042 1029 ntBASIC17.25■□□□□ 0.35
COPB2P35606 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
COPB2P35606 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.25■□□□□ 0.35
COPB2P35606 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COPB2P35606 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COPB2P35606 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.25■□□□□ 0.35
COPB2P35606 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COPB2P35606 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.24■□□□□ 0.35
COPB2P35606 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.24■□□□□ 0.35
COPB2P35606 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
COPB2P35606 TUBBP5-203ENST00000508529 1334 ntBASIC17.24■□□□□ 0.35
COPB2P35606 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COPB2P35606 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 AC073347.1-201ENST00000421633 2643 ntBASIC17.24■□□□□ 0.35
COPB2P35606 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COPB2P35606 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.24■□□□□ 0.35
COPB2P35606 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.24■□□□□ 0.35
COPB2P35606 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.24■□□□□ 0.35
COPB2P35606 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.24■□□□□ 0.35
COPB2P35606 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.24■□□□□ 0.35
COPB2P35606 AP005117.1-202ENST00000581724 1908 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms