Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
LMO1P25800 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO1P25800 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 AJ011932.1-201ENST00000621707 465 ntBASIC12.76□□□□□ -0.37
LMO1P25800 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LMO1P25800 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
LMO1P25800 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LMO1P25800 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
LMO1P25800 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO1P25800 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO1P25800 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO1P25800 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LMO1P25800 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO1P25800 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.76□□□□□ -0.37
LMO1P25800 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
LMO1P25800 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.76□□□□□ -0.37
LMO1P25800 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LMO1P25800 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LMO1P25800 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LMO1P25800 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.75□□□□□ -0.37
LMO1P25800 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
LMO1P25800 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.75□□□□□ -0.37
LMO1P25800 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.75□□□□□ -0.37
LMO1P25800 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 AC093726.1-201ENST00000608064 963 ntBASIC12.75□□□□□ -0.37
LMO1P25800 INTS4P2-202ENST00000614726 2019 ntBASIC12.75□□□□□ -0.37
LMO1P25800 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 AC007431.3-201ENST00000623221 587 ntBASIC12.75□□□□□ -0.37
LMO1P25800 BX539320.1-201ENST00000623759 877 ntBASIC12.75□□□□□ -0.37
LMO1P25800 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LMO1P25800 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO1P25800 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 AL157414.3-201ENST00000624276 1954 ntBASIC12.74□□□□□ -0.37
LMO1P25800 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.74□□□□□ -0.37
LMO1P25800 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.74□□□□□ -0.37
LMO1P25800 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.74□□□□□ -0.37
LMO1P25800 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO1P25800 UGT1A2P-201ENST00000454886 866 ntBASIC12.74□□□□□ -0.37
LMO1P25800 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LMO1P25800 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms