Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
VAMP1P23763 AC018442.1-201ENST00000421439 2061 ntBASIC12.92□□□□□ -0.34
VAMP1P23763 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.92□□□□□ -0.34
VAMP1P23763 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VAMP1P23763 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VAMP1P23763 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VAMP1P23763 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
VAMP1P23763 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.91□□□□□ -0.34
VAMP1P23763 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.91□□□□□ -0.34
VAMP1P23763 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
VAMP1P23763 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
VAMP1P23763 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.91□□□□□ -0.34
VAMP1P23763 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
VAMP1P23763 MYCNOS-202ENST00000641263 1313 ntBASIC12.9□□□□□ -0.34
VAMP1P23763 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VAMP1P23763 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.9□□□□□ -0.34
VAMP1P23763 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VAMP1P23763 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC12.9□□□□□ -0.34
VAMP1P23763 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.9□□□□□ -0.34
VAMP1P23763 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.9□□□□□ -0.34
VAMP1P23763 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.9□□□□□ -0.34
VAMP1P23763 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.9□□□□□ -0.34
VAMP1P23763 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
VAMP1P23763 HNRNPUP1-201ENST00000554987 333 ntBASIC12.9□□□□□ -0.34
VAMP1P23763 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.9□□□□□ -0.34
VAMP1P23763 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms