Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB3BP20337 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RAB3BP20337 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB3BP20337 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB3BP20337 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB3BP20337 FAM86C2P-203ENST00000528684 1004 ntBASIC13.36□□□□□ -0.27
RAB3BP20337 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB3BP20337 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB3BP20337 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB3BP20337 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB3BP20337 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RAB3BP20337 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RAB3BP20337 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB3BP20337 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB3BP20337 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB3BP20337 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RAB3BP20337 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RAB3BP20337 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB3BP20337 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB3BP20337 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB3BP20337 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RAB3BP20337 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 AL139385.1-201ENST00000611744 3272 ntBASIC13.35□□□□□ -0.27
RAB3BP20337 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
RAB3BP20337 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 TARDBPP1-201ENST00000442013 1203 ntBASIC13.35□□□□□ -0.27
RAB3BP20337 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 RN7SL589P-201ENST00000481268 310 ntBASIC13.35□□□□□ -0.27
RAB3BP20337 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.35□□□□□ -0.27
RAB3BP20337 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
RAB3BP20337 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.35□□□□□ -0.27
RAB3BP20337 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
RAB3BP20337 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB3BP20337 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.35□□□□□ -0.27
RAB3BP20337 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB3BP20337 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB3BP20337 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms