Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.15□□□□□ -0.14
PRKCAP17252 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.15□□□□□ -0.14
PRKCAP17252 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
PRKCAP17252 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PRKCAP17252 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 RPL5P21-201ENST00000404620 815 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.15□□□□□ -0.14
PRKCAP17252 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.15□□□□□ -0.14
PRKCAP17252 HMGN1P19-201ENST00000436976 333 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.15□□□□□ -0.14
PRKCAP17252 FAM207CP-201ENST00000443486 507 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 GNAQP1-201ENST00000444815 1067 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 AC023310.3-201ENST00000557027 670 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 AC100756.1-201ENST00000562736 682 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 RARRES2P5-201ENST00000564013 466 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 AC138749.3-201ENST00000567691 622 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 AC000095.1-201ENST00000603208 874 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 AC116165.1-201ENST00000611806 668 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.15□□□□□ -0.14
PRKCAP17252 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
PRKCAP17252 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 C18orf15-201ENST00000623680 2534 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PRKCAP17252 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PRKCAP17252 AC027612.1-201ENST00000445234 2395 ntBASIC14.15□□□□□ -0.14
PRKCAP17252 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKCAP17252 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
PRKCAP17252 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PRKCAP17252 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PRKCAP17252 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PRKCAP17252 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PRKCAP17252 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.14□□□□□ -0.15
PRKCAP17252 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 AC099521.3-201ENST00000624251 2938 ntBASIC14.14□□□□□ -0.15
PRKCAP17252 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.14□□□□□ -0.15
PRKCAP17252 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PRKCAP17252 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 MIR661-201ENST00000384842 89 ntBASIC14.14□□□□□ -0.15
PRKCAP17252 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PRKCAP17252 MEP1AP4-201ENST00000423244 1087 ntBASIC14.14□□□□□ -0.15
PRKCAP17252 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.14□□□□□ -0.15
PRKCAP17252 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PRKCAP17252 AC093004.1-201ENST00000508850 424 ntBASIC14.14□□□□□ -0.15
PRKCAP17252 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.14□□□□□ -0.15
PRKCAP17252 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKCAP17252 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PRKCAP17252 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.14□□□□□ -0.15
PRKCAP17252 LINC02560-201ENST00000596379 459 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms