Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 ZBED1P1-201ENST00000502364 1930 ntBASIC14.13□□□□□ -0.15
PEPDP12955 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PEPDP12955 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PEPDP12955 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
PEPDP12955 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
PEPDP12955 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PEPDP12955 MROH4P-201ENST00000431302 1578 ntBASIC14.13□□□□□ -0.15
PEPDP12955 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
PEPDP12955 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PEPDP12955 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PEPDP12955 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PEPDP12955 CLK3P2-201ENST00000427566 1453 ntBASIC14.12□□□□□ -0.15
PEPDP12955 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PEPDP12955 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PEPDP12955 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.12□□□□□ -0.15
PEPDP12955 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PEPDP12955 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.12□□□□□ -0.15
PEPDP12955 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PEPDP12955 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.12□□□□□ -0.15
PEPDP12955 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.12□□□□□ -0.15
PEPDP12955 AL133267.1-201ENST00000398220 340 ntBASIC14.12□□□□□ -0.15
PEPDP12955 AP006294.1-201ENST00000415407 339 ntBASIC14.12□□□□□ -0.15
PEPDP12955 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.12□□□□□ -0.15
PEPDP12955 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.12□□□□□ -0.15
PEPDP12955 RPL13AP25-201ENST00000484130 612 ntBASIC14.12□□□□□ -0.15
PEPDP12955 AP005018.1-201ENST00000525475 301 ntBASIC14.12□□□□□ -0.15
PEPDP12955 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.12□□□□□ -0.15
PEPDP12955 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.12□□□□□ -0.15
PEPDP12955 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.12□□□□□ -0.15
PEPDP12955 TMEM261P1-201ENST00000604899 340 ntBASIC14.12□□□□□ -0.15
PEPDP12955 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.12□□□□□ -0.15
PEPDP12955 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.12□□□□□ -0.15
PEPDP12955 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.12□□□□□ -0.15
PEPDP12955 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.12□□□□□ -0.15
PEPDP12955 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PEPDP12955 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.12□□□□□ -0.15
PEPDP12955 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.12□□□□□ -0.15
PEPDP12955 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PEPDP12955 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.12□□□□□ -0.15
PEPDP12955 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
PEPDP12955 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.11□□□□□ -0.15
PEPDP12955 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.11□□□□□ -0.15
PEPDP12955 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.11□□□□□ -0.15
PEPDP12955 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PEPDP12955 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.11□□□□□ -0.15
PEPDP12955 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.11□□□□□ -0.15
PEPDP12955 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PEPDP12955 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
PEPDP12955 DGCR5-201ENST00000399539 862 ntBASIC14.11□□□□□ -0.15
PEPDP12955 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PEPDP12955 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PEPDP12955 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.11□□□□□ -0.15
PEPDP12955 FAM86LP-201ENST00000478302 853 ntBASIC14.11□□□□□ -0.15
PEPDP12955 AC011495.1-201ENST00000498085 584 ntBASIC14.11□□□□□ -0.15
PEPDP12955 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.11□□□□□ -0.15
PEPDP12955 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.11□□□□□ -0.15
PEPDP12955 AL596325.1-201ENST00000563991 1082 ntBASIC14.11□□□□□ -0.15
PEPDP12955 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.11□□□□□ -0.15
PEPDP12955 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.11□□□□□ -0.15
PEPDP12955 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
PEPDP12955 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PEPDP12955 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PEPDP12955 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.11□□□□□ -0.15
PEPDP12955 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
PEPDP12955 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.11□□□□□ -0.15
PEPDP12955 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PEPDP12955 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PEPDP12955 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms