Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
DEFA4P12838 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
DEFA4P12838 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
DEFA4P12838 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
DEFA4P12838 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.44□□□□□ -0.42
DEFA4P12838 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 AC107918.4-201ENST00000641966 3141 ntBASIC12.44□□□□□ -0.42
DEFA4P12838 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
DEFA4P12838 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 MROH4P-201ENST00000431302 1578 ntBASIC12.43□□□□□ -0.42
DEFA4P12838 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
DEFA4P12838 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.43□□□□□ -0.42
DEFA4P12838 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 GRK6P1-201ENST00000400595 1711 ntBASIC12.43□□□□□ -0.42
DEFA4P12838 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
DEFA4P12838 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.43□□□□□ -0.42
DEFA4P12838 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
DEFA4P12838 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
DEFA4P12838 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
DEFA4P12838 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.43□□□□□ -0.42
DEFA4P12838 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.43□□□□□ -0.42
DEFA4P12838 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.43□□□□□ -0.42
DEFA4P12838 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.43□□□□□ -0.42
DEFA4P12838 AP006288.1-201ENST00000446065 395 ntBASIC12.43□□□□□ -0.42
DEFA4P12838 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.43□□□□□ -0.42
DEFA4P12838 HNRNPUP1-201ENST00000554987 333 ntBASIC12.43□□□□□ -0.42
DEFA4P12838 AC004449.1-201ENST00000564240 433 ntBASIC12.43□□□□□ -0.42
DEFA4P12838 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.43□□□□□ -0.42
DEFA4P12838 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
DEFA4P12838 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 AL607033.1-201ENST00000623900 1599 ntBASIC12.43□□□□□ -0.42
DEFA4P12838 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.43□□□□□ -0.42
DEFA4P12838 KRT8P12-202ENST00000472924 1397 ntBASIC12.43□□□□□ -0.42
DEFA4P12838 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
DEFA4P12838 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.42□□□□□ -0.42
DEFA4P12838 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
DEFA4P12838 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms