Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
MS4A1P11836 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MS4A1P11836 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.51■□□□□ 0.71
MS4A1P11836 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MS4A1P11836 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MS4A1P11836 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.51■□□□□ 0.71
MS4A1P11836 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.51■□□□□ 0.71
MS4A1P11836 AC107373.2-201ENST00000607735 490 ntBASIC19.51■□□□□ 0.71
MS4A1P11836 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MS4A1P11836 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.51■□□□□ 0.71
MS4A1P11836 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MS4A1P11836 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MS4A1P11836 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MS4A1P11836 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MS4A1P11836 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MS4A1P11836 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
MS4A1P11836 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MS4A1P11836 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
MS4A1P11836 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MS4A1P11836 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MS4A1P11836 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
MS4A1P11836 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC19.5■□□□□ 0.71
MS4A1P11836 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MS4A1P11836 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC19.5■□□□□ 0.71
MS4A1P11836 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.5■□□□□ 0.71
MS4A1P11836 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MS4A1P11836 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.5■□□□□ 0.71
MS4A1P11836 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.5■□□□□ 0.71
MS4A1P11836 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 INGX-202ENST00000489074 768 ntBASIC19.5■□□□□ 0.71
MS4A1P11836 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.5■□□□□ 0.71
MS4A1P11836 BRI3BPP1-201ENST00000594224 787 ntBASIC19.5■□□□□ 0.71
MS4A1P11836 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.5■□□□□ 0.71
MS4A1P11836 AC009118.2-201ENST00000613275 655 ntBASIC19.5■□□□□ 0.71
MS4A1P11836 AL662799.1-202ENST00000614205 422 ntBASIC19.5■□□□□ 0.71
MS4A1P11836 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.5■□□□□ 0.71
MS4A1P11836 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC19.5■□□□□ 0.71
MS4A1P11836 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
MS4A1P11836 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.5■□□□□ 0.71
MS4A1P11836 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC19.5■□□□□ 0.71
MS4A1P11836 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MS4A1P11836 AL161772.1-201ENST00000610494 4412 ntBASIC19.5■□□□□ 0.71
MS4A1P11836 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.49■□□□□ 0.71
MS4A1P11836 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.49■□□□□ 0.71
MS4A1P11836 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC19.49■□□□□ 0.71
MS4A1P11836 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC19.49■□□□□ 0.71
MS4A1P11836 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MS4A1P11836 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC19.49■□□□□ 0.71
MS4A1P11836 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
MS4A1P11836 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 AL928921.2-201ENST00000641325 2442 ntBASIC19.49■□□□□ 0.71
MS4A1P11836 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC19.49■□□□□ 0.71
MS4A1P11836 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.49■□□□□ 0.71
MS4A1P11836 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.49■□□□□ 0.71
MS4A1P11836 CYMP-203ENST00000474680 1263 ntBASIC19.49■□□□□ 0.71
MS4A1P11836 AC104596.2-201ENST00000512793 793 ntBASIC19.49■□□□□ 0.71
MS4A1P11836 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.49■□□□□ 0.71
MS4A1P11836 AC055876.2-201ENST00000531834 546 ntBASIC19.49■□□□□ 0.71
MS4A1P11836 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.49■□□□□ 0.71
MS4A1P11836 AC012183.1-201ENST00000625197 499 ntBASIC19.49■□□□□ 0.71
MS4A1P11836 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MS4A1P11836 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
MS4A1P11836 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
MS4A1P11836 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MS4A1P11836 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms