Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 AC211476.1-201ENST00000503899 468 ntBASIC13.38□□□□□ -0.27
UBCP0CG48 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.38□□□□□ -0.27
UBCP0CG48 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.38□□□□□ -0.27
UBCP0CG48 AC069262.1-201ENST00000539058 672 ntBASIC13.38□□□□□ -0.27
UBCP0CG48 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.38□□□□□ -0.27
UBCP0CG48 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.38□□□□□ -0.27
UBCP0CG48 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.38□□□□□ -0.27
UBCP0CG48 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.38□□□□□ -0.27
UBCP0CG48 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.38□□□□□ -0.27
UBCP0CG48 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.38□□□□□ -0.27
UBCP0CG48 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UBCP0CG48 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 MTHFR-210ENST00000641407 2387 ntBASIC13.38□□□□□ -0.27
UBCP0CG48 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
UBCP0CG48 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.38□□□□□ -0.27
UBCP0CG48 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 AC018442.1-201ENST00000421439 2061 ntBASIC13.38□□□□□ -0.27
UBCP0CG48 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
UBCP0CG48 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UBCP0CG48 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UBCP0CG48 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.38□□□□□ -0.27
UBCP0CG48 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
UBCP0CG48 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 AC254562.1-201ENST00000417586 456 ntBASIC13.37□□□□□ -0.27
UBCP0CG48 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 SDHAP3-202ENST00000515467 728 ntBASIC13.37□□□□□ -0.27
UBCP0CG48 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.37□□□□□ -0.27
UBCP0CG48 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 SAMD11P1-201ENST00000571429 661 ntBASIC13.37□□□□□ -0.27
UBCP0CG48 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.37□□□□□ -0.27
UBCP0CG48 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 AC000095.1-201ENST00000603208 874 ntBASIC13.37□□□□□ -0.27
UBCP0CG48 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.37□□□□□ -0.27
UBCP0CG48 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.37□□□□□ -0.27
UBCP0CG48 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
UBCP0CG48 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
UBCP0CG48 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 AC113367.3-201ENST00000508316 1912 ntBASIC13.37□□□□□ -0.27
UBCP0CG48 BX640514.1-201ENST00000583223 1918 ntBASIC13.37□□□□□ -0.27
UBCP0CG48 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBCP0CG48 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
UBCP0CG48 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.37□□□□□ -0.27
UBCP0CG48 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UBCP0CG48 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UBCP0CG48 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.36□□□□□ -0.27
UBCP0CG48 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 AC018529.2-202ENST00000611482 3087 ntBASIC13.36□□□□□ -0.27
UBCP0CG48 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBCP0CG48 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms