Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.81□□□□□ -0.2
HMGN1P05114 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGN1P05114 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HMGN1P05114 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.81□□□□□ -0.2
HMGN1P05114 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HMGN1P05114 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.81□□□□□ -0.2
HMGN1P05114 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HMGN1P05114 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HMGN1P05114 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HMGN1P05114 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HMGN1P05114 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGN1P05114 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGN1P05114 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGN1P05114 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HMGN1P05114 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGN1P05114 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HMGN1P05114 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.81□□□□□ -0.2
HMGN1P05114 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HMGN1P05114 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.81□□□□□ -0.2
HMGN1P05114 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGN1P05114 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 BEND3P1-201ENST00000421591 1944 ntBASIC13.8□□□□□ -0.2
HMGN1P05114 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HMGN1P05114 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGN1P05114 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HMGN1P05114 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HMGN1P05114 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGN1P05114 TPT1P11-201ENST00000458482 498 ntBASIC13.8□□□□□ -0.2
HMGN1P05114 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.8□□□□□ -0.2
HMGN1P05114 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.8□□□□□ -0.2
HMGN1P05114 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.8□□□□□ -0.2
HMGN1P05114 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.8□□□□□ -0.2
HMGN1P05114 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 AC004835.2-201ENST00000603762 682 ntBASIC13.8□□□□□ -0.2
HMGN1P05114 MIR6080-201ENST00000617359 66 ntBASIC13.8□□□□□ -0.2
HMGN1P05114 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.8□□□□□ -0.2
HMGN1P05114 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HMGN1P05114 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGN1P05114 AC097359.2-201ENST00000604992 2389 ntBASIC13.8□□□□□ -0.2
HMGN1P05114 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HMGN1P05114 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HMGN1P05114 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 LINC01230-201ENST00000625222 3017 ntBASIC13.8□□□□□ -0.2
HMGN1P05114 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
HMGN1P05114 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.8□□□□□ -0.2
HMGN1P05114 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HMGN1P05114 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGN1P05114 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGN1P05114 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HMGN1P05114 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGN1P05114 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.79□□□□□ -0.2
HMGN1P05114 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGN1P05114 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HMGN1P05114 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.79□□□□□ -0.2
HMGN1P05114 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGN1P05114 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HMGN1P05114 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms